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Document(s)
Title
 
:  Comparative physical maps derived from BAC end sequences of tilapia (Oreochromis niloticus)
Lindblad-Toh Kerstin;Di Palma Federica;Johnson Jeremy;Poulain Julie;Dossat Carole;Stuart Andrew;Amemiya Chris;Lee Bo-Young;Howe Aimee E;Katagiri Takayuki;Conte Matthew A;Soler Lucile;Baroiller Jean-Francois;D'Cotta Helena;Ozouf-Costaz Catherine;Kocher Thomas D
Abstract Background The Nile tilapia is the second most important fish in aquaculture. It is an excellent laboratory model, and is closely related to the African lake cichlids famous for their rapid rates of speciation. A suite of genomic resources h...
 
:  A high-resolution map of the Nile tilapia genome: a resource for studying cichlids and other percomorphs
Guyon Richard;Rakotomanga Michaelle;Azzouzi Naoual;Coutanceau Jean Pierre;Bonillo Celine;D’Cotta Helena;Pepey Elodie;Soler Lucile;Rodier-Goud Marguerite;D’Hont Angelique;Conte Matthew A;van Bers Nikkie EM;Penman David J;Hitte Christophe;Crooijmans Richard PMA;Kocher Thomas D;Ozouf-Costaz Catherine;Baroiller Jean;Galibert Francis
Abstract Background The Nile tilapia (Oreochromis niloticus) is the second most farmed fish species worldwide. It is also an important model for studies of fish physiology, particularly because of its broad tolerance to an array of environments. It i...
 
:  DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey
Dettai, Agnes;Adamowizc, Sarah J.;Allcock, Louise;Arango, Claudia P.;Barnes, David K.A.;Barratt, Iain;Chenuil, Anne;Couloux, Arnaud;Cruaud, Corinne;David, Bruno;Denis, Françoise;Denys, Gael;Díaz, Angie;Eléaume, Marc;Féral, Jean-Pierre;Froger, Aurélie;Gallut, Cyril;Grant, Rachel;Griffiths, Huw J.;Held, Christoph;Hemery, Lenaïg G.;Hosie, Graham;Kuklinski, Piotr;Lecointre, Guillaume;Linse, Katrin;Lozouet, Pierre;Mah, Christopher;Monniot, Françoise;Norman, Mark D.;O'Hara, Timothy;Ozouf-Costaz, Catherine;Piedallu, Claire;Pierrat, Benjamin;Poulin, Elie;Puillandre, Nicolas;Riddle, Martin;Samadi, Sarah;Saucède, Thomas;Schubart, Christoph;Smith, Peter J.;Stevens, Darren W.;Steinke, Dirk;Strugnell, Jan M.;Tarnowska, K.;Wadley, Victoria;Améziane, Nadia
The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Cen...
 
:  Fishing for sex genes by chromosome microdissection in two tilapia species with different sex determining systems
D'Cotta, Helena;Coutanceau, Jean-Pierre;Pepey, Elodie;Baaziz, S.B.;Coriton, Olivier;Bonillo, Céline;Rodier-Goud, Marguerite;Soler, Lucile;D'Hont, Angélique;Kocher, Thomas D.;Ozouf-Costaz, Catherine;Baroiller, Jean-François
In the tilapia species group, the major sex determining factors have been located on Linkage Group 1 (LG1), on a small chromosome (Chr) pair in Oreochromis niloticus, on LG3 (the largest Chr pair) in O. aureus or on both, depending on populations/str...
 
:  The genomic substrate for adaptive radiation in African cichlid fish
Brawand, David;Wagner, Catherine E.;Li, Yang I.;Malinsky, Milan;Keller, Irène;Fan, Shaohua;Simakov, Oleg;Ng, Alvin Y.;Lim, Zhi Wei;Bezault, Etienne;Turner-Maier, Jason;Johnson, Jeremy;Alcazar, Rosa;Noh, Hyun Ji;Russell, Pamela;Aken, Bronwen;Alföldi, Jessica;Amemiya, Chris;Azzouzi, Naoual;Baroiller, Jean-François;Barloy-Hubler, Frédérique;Berlin, Aaron;Bloomquist, Ryan;Carleton, Karen L.;Conte, Matthew A.;D'Cotta, Helena;Eshel, Orly;Gaffney, Leslie;Galibert, Francis;Gante, Hugo F.;Gnerre, Sante;Greuter, Lucie;Guyon, Richard;Haddad, Nathalie S.;Haerty, Wilfried;Harris, Rayna M.;Hofmann, Hans A.;Hourlier, Thibaut;Hulata, Gideon;Jaffe, David B.;Lara, Marcia;Lee, Alison P.;MacCallum, Iain;Mwaiko, Salome;Nikaido, Masato;Nishihara, Hidenori;Ozouf-Costaz, Catherine;Penman, David;Przybylski, Darius;Rakotomanga, Michelle;Renn, Suzy C. P.;Ribeiro, Filipe J.;Ron, Micha;Salzburger, Walter;Sanchez-Pulido, Luis;Santos, Emilia;Searle, Steve;Sharpe, Ted;Swofford, Ross;Tan, Frederick J.;Williams, Louise;Young, Sarah;Yin, Shuangye;Okada, Norihiro;Kocher, Thomas D.;Miska, Eric A.;Lander, Eric S.;Venkatesh, Byrappa;Fernald, Russell D.;Meyer, Axel;Ponting, Chris P.;Streelman, J. Todd;Lindblad-Toh, Kerstin;Seehausen, Ole;Di Palma, Frederica
Cichlid fishes are famous for large, diverse and replicated adaptive radiations in the Great Lakes of East Africa. To understand the molecular mechanisms underlying cichlid phenotypic diversity, we sequenced the genomes and transcriptomes of five lin...
 
:  A high-resolution map of the Nile tilapia genome: A resource for studying cichlids and other percomorphs
Guyon, Richard;Rakotomanga, Michelle;Azzouzi, Naoual;Coutanceau, Jean-Pierre;Bonillo, Céline;D'Cotta, Helena;Pepey, Elodie;Soler, Lucile;Rodier-Goud, Marguerite;D'Hont, Angélique;Conte, Matthieu;Van Bers, Nikkie;Penman, David;Hitte, Christophe;Crooijmans, Richard;Kocher, Thomas D.;Ozouf-Costaz, Catherine;Baroiller, Jean-François;Galibert, Francis
Background: The Nile tilapia (Oreochromis niloticus) is the second most farmed fish species worldwide. It is also an important model for studies of fish physiology, particularly because of its broad tolerance to an array of environments. It is a good...
 
:  Microdissection and DOP-PCR as a way to study the evolution of an old sex chromosome pair using two sister-species of Tilapia with different sex determination systems, O. aureus and O. niloticus
Poonlaphdecha, Srisupaph;Pepey, Elodie;Coriton, Olivier;Coutanceau, Eric;D'Hont, Angélique;Kocher, Thomas D.;Ozouf-Costaz, Catherine;Baroiller, Jean-François;D'Cotta, Helena
Within the tilapia group, the sex determining locus has been located on linkage group 1 (LG1) in Oreochromis niloticus, whereas in O. aureus both LG1 and LG3 are sex-linked. Using specific BAC clones as probes for FISH, LG3 and LG1 have been located ...